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Harold P. de Vladar

 

2009, PhD Mathematical & Natural Sciences

2003, MSc Applied Mathematics                                          CV

1999, Biologist & minor in Physics

 

 

From the major transitions to the micro-evolutionary changes, selection creates and encodes information in the genes. In my research I apply theoretical methods to understand the origins and evolution of genetic systems partly in terms of information. Currently I am  focusing my research efforts in two main projects. 

 

  1. There is an analogy between statistical mechanics and the evolution of quantitative traits. Taking advantage of it, I study the long-term response to the joint action of selection, mutation and drift, over a polygenic trait. (More info)

    Another aspect of this analogy allows to study the limits of how much information per generation can selection transduce from the phenotype into the genes.

    The amount of encoded information can, in principle, be tuned by canalizing the genetic effects. However if canalization is linear these limits are broad, compared to canalizations that are non-linear.

  2. There are several theories on the origins of the genetic code. Although we might think that because it was established eons ago we have no evidence of the initial processes leading to it, that is not true. The enzymatic machinery of protein synthesis -and the code itself- hides many molecular fossils that point to ancient sequences and molecular structures of prebiotic RNA's. The analysis of such genetic and structural data allows to discern distinct prebiotic scenarios for the origins of the code.

Other interests I have are: the evolution of microsatellite repeats when selection acts against their size, the typical assumption is that these genetic elements evolve in a neutral fashion, but there are examples -like regulatory regions- where the microsatellites are under selection. Here, I want to understand the maintenance of polymorphisms and its pleiotropic effects. Population dynamics, studying how natural selection can affect the patterns of population growth. This subject is a meeting point for several aspects of the evolutionary theory, since it involves several fields -in particular population genetics, life history theory, and evolutionary games. In this respect I am interested in developing sound hypotheses on the determinants of growth patterns, and ways to verify these. Particularly useful is the application to the MacArthur's theory of island biogeography, since it allows a rigourous comparative framework. I also apply the study of population dynamics to diseases  (malaria & cancer), as a contribution to the understanding of factors that cause much human suffering.

 

04/14/10

Publications

  •  Peer reviewed journals

Barton, N.H. and de Vladar, H.P. "Statistical Mechanics and the Evolution of Polygenic Quantitative Traits". Genetics 183(3):997-1011, 2009. doi:10.1534/genetics.108.099309 | PDFS.I.Highlights |

De Vladar, H.P. and Pen, I. "Determinism, Noise, and Spurious Estimations in a Generalised Model of Population Growth" Physica A 373:477-485, 2007. doi:10.1016/j.physa.2006.06.025 | PDF | arXiv |

De Vladar, H.P. "Density-Dependence as a Size-Independent Regulatory Mechanism" J. Theor. Biol. 238(2):245-256, 2006. doi:10.1016/j.jtbi.2005.05.014 | PDF | arXiv |

De Vladar, H.P. and González, J.A. "Dynamic response of cancer under the influence of immunological activity and therapy" J. Theor. Biol. 227(3):335-348, 2004. doi:10.1016/j.jtbi.2003.11.012 | PDF | CommentReply |

González, J.A., de Vladar, H.P. and Rebolledo, T.M. "New Late Intensification Schedules for Cancer Treatmens" Acta Cientif. Venez. 54(4):263-273 , 2003.  PDF |

 

  • Book chapters

De Vladar, H.P. and Chela-Flores, J. Can Multicellularity be anticipated in the exploration of the solar system? in: Hanslmeier, A.; Kempe, S.; Seckbach, J. (eds.) Genesis: Origin of Life on Earth and Planets. Series: Cellular Origin and Life in Extreme Habitats and Astrobiology, Springer: Dordrecht,  The Netherlands (Forthcoming) 

De Vladar, H.P. Mecanismos de Evolución Cuantiativa in: Cipriani, R. and de Vladar H.P. (Eds.). Modelos y Simulaciones Biológicas (Forthcoming; in spanish).

De Vladar, H.P. Síntesis prebiótica de aminoácidos y otras moleculas relacionadas in: Falcon, N. and Loyo, Y. (eds.) Ab Initio: Origenes del Universo, la vida y la inteligencia. Edited by "Consejo de Desarrollo Cientifico y Tecnologico" Universidad de Carabobo, Venezuela, 2007. 241 p. (in spanish). ISBN: 978-980-12-2752-6

De Vladar, H.P., Cipriani, R., Scharifker, B. and Bubis, J. A Mechanism for the Prebiotic Emergence of Proteins 83-87 in: Seckbach, J.; Chela-Flores, J.; Owen, T.; Raulin, F. (eds.) Life in the Universe From the Miller Experiment to the Search for Life on Other Worlds. Series: Cellular Origin, Life in Extreme Habitats and Astrobiology, Vol. 7. Kluwer Academic Publishers, Dordrecht, The Netherlands. 2004, XXX, 374 p. ISBN: 1-4020-2371-5 / 1-4020-3093-2 GoogleBooks (Email me if you would like a reprint of the article)

 

  • PhD Thesis

De Vladar, H.P. Stochasticity and variability in the dynamics and genetics of populations. 2009. 331p.  PDF | (Email me if you would like a hard copy)

 

Collaborators

Nick Barton

               

Ido Pen

Julian Chela-Flores

Eörs Szathmáry

Roberto Cipriani

Leonardo Trujillo

Omar J. Cornejo

Chris Watkins

Vincent A.A. Jansen

Jochen B.W. Wolf


 

 

 

Full contacts

Harold P. de Vladar

Evolutionary Genetics

Institute of Science & Technology Austria

Am Campus 1. A-3400 Klosterneuburg

Austria 

 

Tel:+43 2243 9000 3005

Fax:+43 2243 9000 2000

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